Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DN752_RS00575 | Not Available | Positive | 137041 - 137379 | 12799.1 |
| duf4861 domain-containing protein | DN752_RS00580 | Not Available | Negative | 137542 - 138864 | 49747.6 |
| hypothetical protein | DN752_RS00585 | Not Available | Negative | 138861 - 140642 | 67571.3 |
| ragb/susd family nutrient uptake outer membrane protein | DN752_RS00590 | Not Available | Negative | 140726 - 142324 | 59345.8 |
| susc/raga family tonb-linked outer membrane protein | DN752_RS00595 | Not Available | Negative | 142337 - 145363 | 112271.0 |
| solute:sodium symporter family transporter | DN752_RS00600 | Not Available | Negative | 145882 - 147465 | 57326.7 |
| metallophosphoesterase family protein | DN752_RS00605 | Not Available | Positive | 148565 - 150403 | 68800.1 |
| laci family dna-binding transcriptional regulator | DN752_RS00610 | Not Available | Negative | 151048 - 152076 | 37992.9 |
| fibrobacter succinogenes major paralogous domain-containing protein | DN752_RS00615 | Not Available | Positive | 152316 - 153566 | 47351.1 |
| fibrobacter succinogenes major paralogous domain-containing protein | DN752_RS00620 | Not Available | Positive | 153594 - 154853 | 47512.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
