Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DN752_RS00520 | Not Available | Negative | 125257 - 125673 | 16034.2 |
| trna 2-thiouridine(34) synthase mnma | DN752_RS00525 | Not Available | Positive | 126586 - 127797 | 45088.1 |
| duf2911 domain-containing protein | DN752_RS00530 | Not Available | Positive | 127985 - 128503 | 19001.3 |
| atp-dependent helicase hrpb | DN752_RS00535 | Not Available | Positive | 128776 - 131259 | 92870.3 |
| cold-shock protein | DN752_RS00540 | Not Available | Positive | 131459 - 131692 | 8832.41 |
| nipsnap family protein | DN752_RS00550 | Not Available | Positive | 132101 - 132868 | 29502.1 |
| hypothetical protein | DN752_RS00555 | Not Available | Negative | 133163 - 133753 | 21839.2 |
| heat repeat domain-containing protein | DN752_RS00560 | Not Available | Negative | 133859 - 134386 | 20158.8 |
| hypothetical protein | DN752_RS00565 | Not Available | Positive | 134466 - 135164 | 26842.0 |
| long-chain fatty acid transport protein | DN752_RS00570 | Not Available | Positive | 135320 - 136759 | 53429.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
