Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein | DN752_RS00475 | Not Available | Negative | 108489 - 109799 | 47310.2 |
| sulfatase-like hydrolase/transferase | DN752_RS00480 | Not Available | Negative | 109981 - 112026 | 76531.9 |
| atp-binding protein | DN752_RS00485 | Not Available | Positive | 112480 - 113619 | 41777.1 |
| nickel uptake transporter family protein | DN752_RS00490 | Not Available | Negative | 113761 - 114474 | 26282.0 |
| duf6686 family protein | DN752_RS00495 | Not Available | Negative | 114492 - 114818 | 12790.4 |
| tonb-dependent receptor | DN752_RS00500 | Not Available | Negative | 115009 - 117372 | 87453.8 |
| t9ss type a sorting domain-containing protein | DN752_RS25085 | Not Available | Negative | 118119 - 118766 | 24003.9 |
| lamg-like jellyroll fold domain-containing protein | DN752_RS25090 | Not Available | Negative | 118736 - 122851 | 150734.0 |
| hypothetical protein | DN752_RS00510 | Not Available | Positive | 123265 - 123648 | 14639.2 |
| thump domain-containing class i sam-dependent rna methyltransferase | DN752_RS00515 | Not Available | Negative | 123876 - 125042 | 44421.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
