Echinicola strongylocentroti strain MEBiC08714

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Echinicola

Description

Echinicola strongylocentroti strain MEBiC08714 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain is classified as a heterotroph, indicating that it obtains its energy from organic compounds. It thrives optimally at a temperature of 25°C and falls within the mesophilic temperature range, which is typically between 20°C and 45°C. The strain possesses a single replicon, which is a defining feature of its genetic structure. The genomic data for Echinicola strongylocentroti strain MEBiC08714 can be accessed under the accession number NZ_CP030041.1. The ecological significance of Echinicola strongylocentroti strain MEBiC08714 can be inferred from its heterotrophic lifestyle and aerobic metabolism. As a heterotroph, this bacterium likely plays a crucial role in the decomposition of organic matter within its environment, thus contributing to nutrient cycling. Its ability to thrive in a mesophilic temperature range suggests that it may be well-adapted to temperate ecosystems, where it could interact with various organic substrates and other microbial communities. This interaction highlights the importance of Echinicola strongylocentroti in maintaining the balance of microbial ecosystems and facilitating the breakdown of complex organic materials.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusEchinicola
SpeciesEchinicola strongylocentroti
Strainstrain MEBiC08714

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceheterotroph
PathogenicityNot Available

Genome Summary

Echinicola strongylocentroti strain MEBiC08714 chromosome,

Gene Summary

Adenine Count

1744517 bp

Thymine Count

1747944 bp

Guanine Count

1384406 bp

Cytosine Count

1375277 bp

Genome Length

6252144 bp

Protein-coding Genes

4741 genes

Non-Coding Genes

79 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trigger factorDN752_RS06300Not AvailablePositive1707050 - 170837850249.4
atp-dependent clp protease proteolytic subunitDN752_RS06305Not AvailablePositive1708459 - 170912724722.7
atp-dependent clp protease atp-binding subunit clpxDN752_RS06310Not AvailablePositive1709133 - 171035645559.1
lipid-a-disaccharide synthaseDN752_RS06315Not AvailableNegative1710422 - 171153742390.6
6-pyruvoyl trahydropterin synthase family proteinDN752_RS06320Not AvailableNegative1711627 - 171204616024.3
ragb/susd family nutrient uptake outer membrane proteinDN752_RS06325Not AvailableNegative1712362 - 171379852771.1
susc/raga family tonb-linked outer membrane proteinDN752_RS06330Not AvailableNegative1713811 - 1716798107519.0
ompa family proteinDN752_RS06335Not AvailableNegative1718518 - 172042871929.5
7-carboxy-7-deazaguanine synthase queeDN752_RS06340Not AvailableNegative1720434 - 172106023627.4
bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolaseDN752_RS06345Not AvailableNegative1721230 - 172211431718.4

Displaying genes 1301 – 1310 of 4820 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.