Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DN752_RS00380 | Not Available | Negative | 83642 - 85782 | 79496.4 |
| 30s ribosomal protein s15 | DN752_RS00385 | Not Available | Negative | 85893 - 86168 | 10693.1 |
| lptf/lptg family permease | DN752_RS00390 | Not Available | Negative | 86248 - 88068 | 68575.1 |
| start-like domain-containing protein | DN752_RS00395 | Not Available | Negative | 88153 - 88548 | 15303.8 |
| Trna-met | Not Available | Not Available | Positive | 88707 - 88780 | Not Available |
| 50s ribosomal protein l20 | DN752_RS00405 | Not Available | Negative | 89481 - 89825 | 13201.2 |
| 50s ribosomal protein l35 | DN752_RS00410 | Not Available | Negative | 89935 - 90129 | 7494.41 |
| translation initiation factor if-3 | DN752_RS00415 | Not Available | Negative | 90152 - 90703 | 21161.9 |
| threonine--trna ligase | DN752_RS00420 | Not Available | Negative | 90793 - 92742 | 74026.1 |
| sodium:solute symporter | DN752_RS00425 | Not Available | Negative | 93252 - 94961 | 63846.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
