Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| giy-yig nuclease family protein | DN752_RS00330 | Not Available | Negative | 75361 - 75654 | 11732.0 |
| Trna-thr | Not Available | Not Available | Positive | 75690 - 75762 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 75941 - 76013 | Not Available |
| duf349 domain-containing protein | DN752_RS00345 | Not Available | Negative | 76479 - 78359 | 74023.1 |
| yqge/algh family protein | DN752_RS00350 | Not Available | Negative | 78415 - 78984 | 21601.5 |
| pyridoxamine 5'-phosphate oxidase | DN752_RS00355 | Not Available | Positive | 79081 - 79716 | 24364.9 |
| bacillithiol biosynthesis deacetylase bshb1 | DN752_RS00360 | Not Available | Negative | 79744 - 80460 | 26984.9 |
| m23 family metallopeptidase | DN752_RS00365 | Not Available | Negative | 80524 - 81552 | 39689.4 |
| thioredoxin-disulfide reductase | DN752_RS00370 | Not Available | Negative | 81559 - 82503 | 34189.6 |
| rna polymerase sigma factor rpod/siga | DN752_RS00375 | Not Available | Negative | 82695 - 83558 | 32785.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
