Echinicola strongylocentroti strain MEBiC08714

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Echinicola

Description

Echinicola strongylocentroti strain MEBiC08714 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain is classified as a heterotroph, indicating that it obtains its energy from organic compounds. It thrives optimally at a temperature of 25°C and falls within the mesophilic temperature range, which is typically between 20°C and 45°C. The strain possesses a single replicon, which is a defining feature of its genetic structure. The genomic data for Echinicola strongylocentroti strain MEBiC08714 can be accessed under the accession number NZ_CP030041.1. The ecological significance of Echinicola strongylocentroti strain MEBiC08714 can be inferred from its heterotrophic lifestyle and aerobic metabolism. As a heterotroph, this bacterium likely plays a crucial role in the decomposition of organic matter within its environment, thus contributing to nutrient cycling. Its ability to thrive in a mesophilic temperature range suggests that it may be well-adapted to temperate ecosystems, where it could interact with various organic substrates and other microbial communities. This interaction highlights the importance of Echinicola strongylocentroti in maintaining the balance of microbial ecosystems and facilitating the breakdown of complex organic materials.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusEchinicola
SpeciesEchinicola strongylocentroti
Strainstrain MEBiC08714

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceheterotroph
PathogenicityNot Available

Genome Summary

Echinicola strongylocentroti strain MEBiC08714 chromosome,

Gene Summary

Adenine Count

1744517 bp

Thymine Count

1747944 bp

Guanine Count

1384406 bp

Cytosine Count

1375277 bp

Genome Length

6252144 bp

Protein-coding Genes

4741 genes

Non-Coding Genes

79 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDN752_RS04915Not AvailablePositive1264514 - 126608557021.7
family 16 glycosylhydrolaseDN752_RS04920Not AvailablePositive1266423 - 126774850391.0
l-rhamnose/proton symporter rhatDN752_RS04930Not AvailableNegative1268656 - 126966935979.8
aldose epimerase family proteinDN752_RS04935Not AvailableNegative1269701 - 127073538394.6
mandelate racemase/muconate lactonizing enzyme family proteinDN752_RS04940Not AvailableNegative1270819 - 127194941599.5
aldehyde dehydrogenaseDN752_RS04945Not AvailableNegative1271952 - 127339752829.0
sdr family nad(p)-dependent oxidoreductaseDN752_RS04950Not AvailableNegative1273433 - 127420327507.8
zinc-dependent alcohol dehydrogenaseDN752_RS04955Not AvailableNegative1274216 - 127523536804.4
glycoside hydrolase family 117 proteinDN752_RS04960Not AvailableNegative1275351 - 127653844221.4
duf2231 domain-containing proteinDN752_RS04965Not AvailableNegative1277407 - 127878649750.0

Displaying genes 1021 – 1030 of 4820 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.