Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Echinicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Echinicola |
| Species | Echinicola strongylocentroti |
| Strain | strain MEBiC08714 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1744517 bp
Thymine Count
1747944 bp
Guanine Count
1384406 bp
Cytosine Count
1375277 bp
Genome Length
6252144 bp
Protein-coding Genes
4741 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DN752_RS00235 | Not Available | Negative | 56751 - 57008 | 10335.0 |
| phytanoyl-coa dioxygenase family protein | DN752_RS00240 | Not Available | Positive | 57286 - 58515 | 46845.9 |
| tetratricopeptide repeat protein | DN752_RS00245 | Not Available | Negative | 58667 - 59266 | 21894.7 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | DN752_RS00250 | Not Available | Negative | 59334 - 60149 | 29381.6 |
| glycosyltransferase | DN752_RS00255 | Not Available | Positive | 60195 - 61307 | 42921.8 |
| metal-dependent transcriptional regulator | DN752_RS00260 | Not Available | Positive | 62067 - 62735 | 25268.4 |
| metal abc transporter solute-binding protein, zn/mn family | DN752_RS00265 | Not Available | Positive | 62732 - 63676 | 34857.9 |
| metal abc transporter atp-binding protein | DN752_RS00270 | Not Available | Positive | 63645 - 64433 | 29096.3 |
| iron chelate uptake abc transporter family permease subunit | DN752_RS00275 | Not Available | Positive | 64435 - 65727 | 47864.0 |
| metal abc transporter permease | DN752_RS00280 | Not Available | Positive | 65724 - 66620 | 32136.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
