Lactobacillus amylovorus strain PMRA3

Gram-positiveRodNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Lactobacillus

Description

Lactobacillus amylovorus strain PMRA3 is a Gram-positive, non-motile, anaerobic bacterium characterized by its rod shape and chain cell arrangement. This strain is mesophilic, thriving within a moderate temperature range. It possesses a single membrane and contains two replicons, indicating its genetic structure. Lactobacillus amylovorus strain PMRA3 is free-living and has been identified in multiple habitats, suggesting its versatility in various environments. The strain interacts with multiple hosts, including Homo sapiens (humans), Gallus gallus (domestic chickens), and Aves (birds), indicating its potential significance in the microbiomes of these species. One notable trait of this strain is that it does not form spores, which may influence its survival strategies and ecological roles. The presence of flagella suggests some capacity for movement, although the strain is described as non-motile, which may indicate that the flagella do not contribute to locomotion in the conventional sense. The ecological insight gained from understanding Lactobacillus amylovorus strain PMRA3 highlights its role in various host-associated microbiomes and its potential contributions to gut health and fermentation processes. Its presence across different species underscores its adaptability and importance in microbial communities, which may play a role in digestion and nutrient absorption in humans and other animals. The accessions NZ_CP029755.1 and NZ_CP029754.1 provide a basis for further genomic studies and applications in microbiology.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusLactobacillus
SpeciesLactobacillus amylovorus
Strainstrain PMRA3

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Lactobacillus amylovorus strain PMRA3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementChains
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lactobacillus amylovorus strain PMRA3 plasmid pPMRA301, complete

Gene Summary

Adenine Count

26317 bp

Thymine Count

27601 bp

Guanine Count

14016 bp

Cytosine Count

16291 bp

Genome Length

84225 bp

Protein-coding Genes

81 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
is110 family transposaseDM298_RS02675Not AvailablePositive501423 - 50262545696.4
ydcf family proteinDM298_RS02680Not AvailableNegative502978 - 50420644440.0
ydcf family proteinDM298_RS02685Not AvailableNegative504444 - 50570345066.7
mip/aquaporin family proteinDM298_RS02690Not AvailableNegative505906 - 50665826388.4
alpha-hydroxy-acid oxidizing proteinDM298_RS02695Not AvailablePositive506851 - 50789437457.0
rlua family pseudouridine synthaseDM298_RS02700Not AvailableNegative507951 - 50880832740.8
pbp1a family penicillin-binding proteinDM298_RS02705Not AvailablePositive508899 - 51095675593.4
ylbf family regulatorDM298_RS02710Not AvailablePositive510974 - 51132413345.6
exonuclease sbccd subunit dDM298_RS02715Not AvailablePositive511333 - 51254746235.7
atp-binding proteinDM298_RS02720Not AvailablePositive512528 - 51502394050.0

Displaying genes 701 – 710 of 2174 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.