Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| surface-exposed outer membrane lipoprotein yaiw | BEN53_RS04025 | Not Available | Positive | 797952 - 799046 | 40413.5 |
| yaiy family protein | BEN53_RS04030 | Not Available | Negative | 799104 - 799412 | 11425.2 |
| duf2754 domain-containing protein | BEN53_RS04040 | Not Available | Positive | 799672 - 799884 | 8097.92 |
| d-alanine--d-alanine ligase | BEN53_RS04045 | Not Available | Negative | 799908 - 801002 | 39318.0 |
| hypothetical protein | BEN53_RS04050 | Not Available | Positive | 801080 - 801283 | 8021.04 |
| anti-adapter protein irap | BEN53_RS04055 | Not Available | Positive | 801465 - 801725 | 9937.07 |
| alkaline phosphatase | BEN53_RS04060 | Not Available | Positive | 801825 - 803240 | 49387.2 |
| phosphate starvation-inducible protein psif | BEN53_RS04065 | Not Available | Positive | 803359 - 803679 | 11687.2 |
| diguanylate cyclase adra | BEN53_RS04070 | Not Available | Positive | 803781 - 804896 | 41554.0 |
| pyrroline-5-carboxylate reductase | BEN53_RS04075 | Not Available | Negative | 804913 - 805722 | 28160.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




