Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail terminator | BEN53_RS17085 | Not Available | Negative | 3372593 - 3373477 | 31057.2 |
| Tail protein | BEN53_RS17090 | Not Available | Negative | 3373477 - 3376689 | 115107.0 |
| gpe family phage tail protein | BEN53_RS27895 | Not Available | Negative | 3376765 - 3376923 | 6060.05 |
| Gp15 | BEN53_RS17100 | Not Available | Negative | 3376847 - 3377182 | 11985.2 |
| Hypothetical protein | BEN53_RS17105 | Not Available | Negative | 3377280 - 3377561 | 10321.4 |
| Gp14, phage major tail tube protein | BEN53_RS17110 | Not Available | Negative | 3377564 - 3378088 | 19652.8 |
| Major tail sheath protein | BEN53_RS17115 | Not Available | Negative | 3378085 - 3379512 | 51341.9 |
| Gp12 | BEN53_RS17120 | Not Available | Negative | 3379502 - 3379753 | 9005.54 |
| Gp37 | BEN53_RS17125 | Not Available | Negative | 3379753 - 3380217 | 17409.9 |
| Gp10, conserved hypothetical protein | BEN53_RS17130 | Not Available | Negative | 3380217 - 3380663 | 17027.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




