Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyanate transporter cynx | BEN53_RS03865 | Not Available | Positive | 763197 - 764351 | 41306.0 |
| galactoside o-acetyltransferase | BEN53_RS03870 | Not Available | Negative | 764454 - 765065 | 22765.3 |
| lactose permease | BEN53_RS03875 | Not Available | Negative | 765131 - 766384 | 46609.0 |
| beta-galactosidase | BEN53_RS03880 | Not Available | Negative | 766436 - 769510 | 116770.0 |
| dna-binding transcriptional repressor laci | BEN53_RS03890 | Not Available | Negative | 769633 - 770715 | 38604.5 |
| dna-binding transcriptional regulator | BEN53_RS03895 | Not Available | Negative | 770792 - 771625 | 31305.9 |
| bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase | BEN53_RS03900 | Not Available | Positive | 771816 - 773480 | 62216.3 |
| 2,3-dihydroxyphenylpropionate/2, 3-dihydroxicinnamic acid 1,2-dioxygenase | BEN53_RS03905 | Not Available | Positive | 773482 - 774426 | 34198.0 |
| 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase | BEN53_RS03910 | Not Available | Positive | 774444 - 775310 | 31911.2 |
| 2-keto-4-pentenoate hydratase | BEN53_RS03915 | Not Available | Positive | 775320 - 776129 | 28966.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




