Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| small membrane protein ykgr | BEN53_RS27870 | Not Available | Negative | 708372 - 708473 | 3999.01 |
| nadh-dependent flavin oxidoreductase | BEN53_RS03615 | Not Available | Negative | 708947 - 710089 | 41941.2 |
| alpha/beta hydrolase | BEN53_RS03620 | Not Available | Negative | 710334 - 711254 | 33221.6 |
| lysr family transcriptional regulator | BEN53_RS03625 | Not Available | Positive | 711411 - 712337 | 34333.5 |
| lysr family transcriptional regulator | BEN53_RS03630 | Not Available | Positive | 712537 - 713430 | 33329.3 |
| aldo/keto reductase | BEN53_RS03635 | Not Available | Negative | 713461 - 714450 | 36216.5 |
| aldo/keto reductase | BEN53_RS03640 | Not Available | Negative | 714477 - 715328 | 31883.2 |
| inverse autotransporter adhesin fdec | BEN53_RS03645 | Not Available | Positive | 715894 - 720144 | 149525.0 |
| helix-turn-helix domain-containing protein | BEN53_RS03655 | Not Available | Negative | 720269 - 721126 | 34030.8 |
| aldo/keto reductase | BEN53_RS03660 | Not Available | Positive | 721374 - 722243 | 32730.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




