Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-thr | Not Available | Not Available | Positive | 683974 - 684046 | Not Available |
| duf4145 domain-containing protein | BEN53_RS03465 | Not Available | Positive | 684642 - 685277 | 23625.3 |
| hypothetical protein | BEN53_RS03470 | Not Available | Negative | 685303 - 686091 | 30303.8 |
| hypothetical protein | BEN53_RS03475 | Not Available | Negative | 686145 - 686354 | 7728.38 |
| hypothetical protein | BEN53_RS03480 | Not Available | Negative | 687335 - 687706 | 13214.8 |
| hypothetical protein | BEN53_RS03485 | Not Available | Positive | 688457 - 688885 | 15668.2 |
| hypothetical protein | BEN53_RS03490 | Not Available | Positive | 689015 - 689206 | 6908.24 |
| duf6945 domain-containing protein | BEN53_RS27290 | Not Available | Positive | 689181 - 689981 | 30092.1 |
| hypothetical protein | BEN53_RS03500 | Not Available | Positive | 690105 - 690470 | 14305.6 |
| hypothetical protein | BEN53_RS03505 | Not Available | Positive | 690636 - 690968 | 11660.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




