Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor h | BEN53_RS03410 | Not Available | Positive | 674646 - 675260 | 23039.4 |
| metal-dependent hydrolase | BEN53_RS03415 | Not Available | Positive | 675322 - 675831 | 19478.4 |
| hypothetical protein | BEN53_RS03420 | Not Available | Negative | 675848 - 676090 | 9470.28 |
| cytosol nonspecific dipeptidase | BEN53_RS03425 | Not Available | Negative | 676138 - 677595 | 52920.4 |
| xanthine phosphoribosyltransferase | BEN53_RS03430 | Not Available | Positive | 677856 - 678314 | 16971.6 |
| esterase frsa | BEN53_RS03435 | Not Available | Positive | 678406 - 679650 | 47025.4 |
| sigma factor-binding protein crl | BEN53_RS03440 | Not Available | Positive | 679708 - 680109 | 15599.6 |
| phosphoporin phoe | BEN53_RS03445 | Not Available | Negative | 680148 - 681203 | 38968.1 |
| glutamate 5-kinase | BEN53_RS03450 | Not Available | Positive | 681491 - 682594 | 39076.9 |
| glutamate-5-semialdehyde dehydrogenase | BEN53_RS03455 | Not Available | Positive | 682606 - 683859 | 44704.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




