Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxyacylglutathione hydrolase | BEN53_RS03305 | Not Available | Negative | 657460 - 658215 | 28419.0 |
| class i sam-dependent methyltransferase | BEN53_RS03310 | Not Available | Positive | 658249 - 658971 | 27212.7 |
| ribonuclease hi | BEN53_RS03315 | Not Available | Negative | 658968 - 659435 | 17597.9 |
| dna polymerase iii subunit epsilon | BEN53_RS03320 | Not Available | Positive | 659500 - 660231 | 27100.5 |
| Trna-asp | Not Available | Not Available | Positive | 660364 - 660440 | Not Available |
| 2-oxoglutaramate amidase | BEN53_RS03335 | Not Available | Negative | 660539 - 661309 | 28930.5 |
| ivy family c-type lysozyme inhibitor | BEN53_RS03340 | Not Available | Positive | 661490 - 661936 | 15996.1 |
| acyl-coa dehydrogenase fade | BEN53_RS03345 | Not Available | Negative | 661979 - 664423 | 89174.6 |
| d-sedoheptulose 7-phosphate isomerase | BEN53_RS03350 | Not Available | Positive | 664663 - 665241 | 20748.9 |
| class ii glutamine amidotransferase | BEN53_RS03355 | Not Available | Positive | 665357 - 666124 | 28637.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




