Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| envelope stress response activation lipoprotein nlpe | BEN53_RS03205 | Not Available | Positive | 638522 - 639232 | 25827.7 |
| yaef family permuted papain-like enzyme | BEN53_RS03210 | Not Available | Negative | 639388 - 640212 | 30005.9 |
| proline--trna ligase | BEN53_RS03215 | Not Available | Negative | 640265 - 641983 | 63606.2 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | BEN53_RS03220 | Not Available | Negative | 642094 - 642801 | 26393.8 |
| rcs stress response system protein rcsf | BEN53_RS03225 | Not Available | Negative | 642798 - 643202 | 14164.3 |
| methionine abc transporter substrate-binding lipoprotein metq | BEN53_RS03230 | Not Available | Negative | 643320 - 644135 | 29433.3 |
| methionine abc transporter permease meti | BEN53_RS03235 | Not Available | Negative | 644175 - 644828 | 23257.6 |
| methionine abc transporter atp-binding protein metn | BEN53_RS03240 | Not Available | Negative | 644821 - 645852 | 37774.6 |
| d-glycero-beta-d-manno-heptose 1,7-bisphosphate 7-phosphatase | BEN53_RS03245 | Not Available | Positive | 646040 - 646612 | 21139.2 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 646978 - 648519 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




