Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe(3+)-hydroxamate abc transporter permease fhub | BEN53_RS03005 | Not Available | Positive | 595856 - 597838 | 70426.6 |
| glutamate-1-semialdehyde 2,1-aminomutase | BEN53_RS03010 | Not Available | Negative | 597873 - 599153 | 45385.8 |
| protein yadx | BEN53_RS27410 | Not Available | Positive | 599319 - 599366 | 1806.13 |
| h(+)/cl(-) exchange transporter clca | BEN53_RS03015 | Not Available | Positive | 599378 - 600799 | 50337.9 |
| small protein yadw | BEN53_RS27075 | Not Available | Positive | 600823 - 600888 | 2329.94 |
| iron-sulfur cluster insertion protein erpa | BEN53_RS03020 | Not Available | Positive | 600881 - 601225 | 12101.2 |
| tric cation channel family protein | BEN53_RS03025 | Not Available | Negative | 601272 - 601895 | 22129.1 |
| vitamin b12 abc transporter substrate-binding protein btuf | BEN53_RS03030 | Not Available | Negative | 601933 - 602733 | 29352.4 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | BEN53_RS03035 | Not Available | Negative | 602726 - 603424 | 24355.4 |
| dgtpase | BEN53_RS03040 | Not Available | Positive | 603508 - 605025 | 59386.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




