Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail fiber protein | BEN53_RS05215 | Not Available | Positive | 1007135 - 1009507 | 82659.6 |
| Hypothetical protein | BEN53_RS05220 | Not Available | Positive | 1009507 - 1009788 | 10671.5 |
| Chaperone of endosialidase | BEN53_RS05225 | Not Available | Positive | 1009798 - 1010502 | 26458.2 |
| Hypothetical protein | BEN53_RS05230 | Not Available | Positive | 1010513 - 1010806 | 10947.5 |
| Tail fiber assembly protein | BEN53_RS05235 | Not Available | Positive | 1010825 - 1010944 | 4559.27 |
| Attr | Not Available | Not Available | Positive | 1015253 - 1015299 | Not Available |
| Attl | Not Available | Not Available | Positive | 3351569 - 3351580 | Not Available |
| Hybrid sensor histidine kinase - response regulator | BEN53_RS17025 | Not Available | Positive | 3361730 - 3364486 | 102460.0 |
| hypothetical protein | BEN53_RS27630 | Not Available | Negative | 3364717 - 3364812 | 3565.34 |
| Recombinase family protein | BEN53_RS17035 | Not Available | Negative | 3364889 - 3365461 | 21638.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




