Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein ftsa | BEN53_RS02680 | Not Available | Positive | 527052 - 528314 | 45332.7 |
| cell division protein ftsz | BEN53_RS02685 | Not Available | Positive | 528376 - 529527 | 40326.4 |
| udp-3-o-acyl-n-acetylglucosamine deacetylase | BEN53_RS02690 | Not Available | Positive | 529628 - 530545 | 33957.8 |
| seca translation cis-regulator secm | BEN53_RS02695 | Not Available | Positive | 530776 - 531288 | 18821.5 |
| preprotein translocase subunit seca | BEN53_RS02700 | Not Available | Positive | 531350 - 534055 | 102029.0 |
| 8-oxo-dgtp diphosphatase mutt | BEN53_RS02705 | Not Available | Positive | 534115 - 534513 | 15207.2 |
| dna gyrase inhibitor yacg | BEN53_RS02710 | Not Available | Negative | 534602 - 534799 | 7306.49 |
| cell division protein zapd | BEN53_RS02715 | Not Available | Negative | 534809 - 535552 | 28279.3 |
| dephospho-coa kinase | BEN53_RS02720 | Not Available | Negative | 535552 - 536172 | 22605.0 |
| protein yacm | BEN53_RS27285 | Not Available | Positive | 536197 - 536241 | 1690.26 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




