Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4291 domain-containing protein | BEN53_RS02425 | Not Available | Negative | 471475 - 472074 | 22996.6 |
| bis(5'-nucleosyl)-tetraphosphatase (symmetrical) apah | BEN53_RS02430 | Not Available | Negative | 472099 - 472947 | 31502.6 |
| co2+/mg2+ efflux protein apag | BEN53_RS02435 | Not Available | Negative | 472954 - 473331 | 13867.6 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | BEN53_RS02440 | Not Available | Negative | 473334 - 474155 | 30422.0 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | BEN53_RS02445 | Not Available | Negative | 474152 - 475141 | 35179.9 |
| peptidylprolyl isomerase sura | BEN53_RS02450 | Not Available | Negative | 475141 - 476427 | 47286.5 |
| lps assembly protein lptd | BEN53_RS02455 | Not Available | Negative | 476480 - 478837 | 89663.8 |
| co-chaperone djla | BEN53_RS02460 | Not Available | Positive | 479092 - 479907 | 30597.2 |
| is110-like element is621 family transposase | BEN53_RS02465 | Not Available | Negative | 480026 - 481006 | 36557.2 |
| bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rlua | BEN53_RS02475 | Not Available | Negative | 481304 - 481963 | 24862.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




