Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transfer flavoprotein | BEN53_RS02375 | Not Available | Positive | 462773 - 463543 | 27131.2 |
| electron transfer flavoprotein subunit alpha/fixb family protein | BEN53_RS02380 | Not Available | Positive | 463558 - 464499 | 33530.1 |
| fad-dependent oxidoreductase | BEN53_RS02385 | Not Available | Positive | 464550 - 465836 | 45732.6 |
| ferredoxin-like protein fixx | BEN53_RS02390 | Not Available | Positive | 465833 - 466120 | 10479.5 |
| mfs transporter | BEN53_RS02395 | Not Available | Positive | 466178 - 467509 | 48656.8 |
| glutathione-regulated potassium-efflux system oxidoreductase keff | BEN53_RS02400 | Not Available | Positive | 467617 - 468147 | 20171.1 |
| glutathione-regulated potassium-efflux system protein kefc | BEN53_RS02405 | Not Available | Positive | 468140 - 470002 | 67695.9 |
| type 3 dihydrofolate reductase | BEN53_RS02410 | Not Available | Positive | 470194 - 470673 | 18000.3 |
| type ii toxin-antitoxin system ccda family antitoxin | BEN53_RS02415 | Not Available | Positive | 470694 - 470873 | 6748.62 |
| hypothetical protein | BEN53_RS02420 | Not Available | Negative | 470990 - 471439 | 17472.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




