Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mdr efflux pump acrab transcriptional activator roba | BEN53_RS02115 | Not Available | Negative | 406888 - 407757 | 33146.8 |
| protein crea | BEN53_RS02120 | Not Available | Positive | 407968 - 408441 | 17108.8 |
| two-component system response regulator creb | BEN53_RS02125 | Not Available | Positive | 408454 - 409143 | 26200.8 |
| two-component system sensor histidine kinase crec | BEN53_RS02130 | Not Available | Positive | 409143 - 410567 | 52252.3 |
| cell envelope integrity protein cred | BEN53_RS02135 | Not Available | Positive | 410625 - 411977 | 49845.7 |
| two-component system response regulator arca | BEN53_RS02140 | Not Available | Negative | 412037 - 412753 | 27293.6 |
| protein yjjy | BEN53_RS02145 | Not Available | Positive | 412849 - 412989 | 4886.09 |
| trna/rrna methyltransferase | BEN53_RS02150 | Not Available | Positive | 413389 - 414075 | 25290.5 |
| hypothetical protein | BEN53_RS02155 | Not Available | Positive | 414289 - 414372 | 2769.39 |
| bifunctional aspartate kinase/homoserine dehydrogenase i | BEN53_RS02160 | Not Available | Positive | 414454 - 416916 | 89139.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




