Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ytjb family periplasmic protein | BEN53_RS02065 | Not Available | Negative | 396743 - 397387 | 24035.1 |
| phosphoserine phosphatase | BEN53_RS02070 | Not Available | Positive | 397493 - 398461 | 35074.8 |
| dna repair protein rada | BEN53_RS02075 | Not Available | Positive | 398510 - 399892 | 49445.0 |
| multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase nadr | BEN53_RS02080 | Not Available | Positive | 399913 - 401145 | 47235.2 |
| nads family protein | BEN53_RS27280 | Not Available | Positive | 401179 - 401346 | 6374.7 |
| energy-dependent translational throttle protein etta | BEN53_RS02085 | Not Available | Negative | 401452 - 403119 | 62446.5 |
| murein transglycosylase | BEN53_RS02095 | Not Available | Positive | 403330 - 405267 | 73371.1 |
| trp operon repressor | BEN53_RS02100 | Not Available | Positive | 405357 - 405683 | 12406.0 |
| inosine/xanthosine triphosphatase | BEN53_RS02105 | Not Available | Negative | 405677 - 406192 | 18394.8 |
| 2,3-diphosphoglycerate-dependent phosphoglycerate mutase gpmb | BEN53_RS02110 | Not Available | Positive | 406244 - 406891 | 24066.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




