Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BEN53_RS26990 | Not Available | Negative | 264362 - 264652 | 10887.7 |
| type ii toxin-antitoxin system vapb family antitoxin | BEN53_RS27000 | Not Available | Positive | 264948 - 265178 | 8816.38 |
| type ii toxin-antitoxin system vapc family toxin | BEN53_RS27005 | Not Available | Positive | 265175 - 265591 | 15230.6 |
| aaa family atpase | BEN53_RS27010 | Not Available | Negative | 265753 - 267891 | 81091.3 |
| hypothetical protein | BEN53_RS27015 | Not Available | Positive | 268245 - 268502 | 9983.83 |
| hypothetical protein | BEN53_RS27020 | Not Available | Positive | 268502 - 269092 | 21485.9 |
| aaa family atpase | BEN53_RS27025 | Not Available | Positive | 269355 - 270815 | 54531.7 |
| proq/fino family protein | BEN53_RS27030 | Not Available | Positive | 271103 - 271720 | 23220.9 |
| is1380-like element isecp1 family transposase | BEN53_RS27035 | Not Available | Positive | 272118 - 273380 | 48559.7 |
| extended-spectrum class a beta-lactamase ctx-m-55 | BEN53_RS27040 | Not Available | Positive | 273636 - 274511 | 31173.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




