Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| omptin family outer membrane protease | BEN53_RS26870 | Not Available | Negative | 247971 - 248924 | 35635.3 |
| wbuc family cupin fold metalloprotein | BEN53_RS26885 | Not Available | Negative | 250221 - 250400 | 7065.4 |
| is3 family transposase | BEN53_RS26890 | Not Available | Positive | 250539 - 251752 | 46028.8 |
| wbuc family cupin fold metalloprotein | BEN53_RS26895 | Not Available | Negative | 251900 - 252168 | 10431.5 |
| is1-like element is1b family transposase | BEN53_RS26905 | Not Available | Positive | 252225 - 252922 | 26558.3 |
| wbuc family cupin fold metalloprotein | BEN53_RS26910 | Not Available | Negative | 252939 - 253136 | 6325.46 |
| colicin v immunity protein | BEN53_RS27260 | Not Available | Negative | 253114 - 253350 | 9145.14 |
| wbuc family cupin fold metalloprotein | BEN53_RS26920 | Not Available | Negative | 253892 - 254095 | 8042.52 |
| wbuc family cupin fold metalloprotein | BEN53_RS26925 | Not Available | Positive | 254268 - 254435 | 5571.95 |
| wbuc family cupin fold metalloprotein | BEN53_RS26930 | Not Available | Negative | 254453 - 254530 | 2960.91 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




