Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase | BEN53_RS01915 | Not Available | Negative | 371109 - 373400 | 85528.7 |
| duf2501 domain-containing protein yjja | BEN53_RS01920 | Not Available | Negative | 373654 - 374148 | 17326.6 |
| dna replication protein dnac | BEN53_RS01925 | Not Available | Negative | 374197 - 374934 | 27936.8 |
| primosomal protein dnat | BEN53_RS01930 | Not Available | Negative | 374937 - 375476 | 19486.2 |
| threonine/serine exporter | BEN53_RS01935 | Not Available | Negative | 375583 - 376056 | 17047.6 |
| threonine/serine thre exporter family protein | BEN53_RS01940 | Not Available | Negative | 376047 - 376817 | 27986.6 |
| helix-turn-helix domain-containing protein | BEN53_RS01945 | Not Available | Positive | 377436 - 378161 | 27093.7 |
| dna-binding transcriptional activator bglj | BEN53_RS01950 | Not Available | Positive | 378119 - 378796 | 25535.0 |
| siderophore-iron reductase fhuf | BEN53_RS01955 | Not Available | Negative | 378835 - 379623 | 29977.2 |
| duf1435 domain-containing protein | BEN53_RS01960 | Not Available | Positive | 379764 - 380000 | 8675.38 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




