Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron/manganese abc transporter substrate-binding protein sita | BEN53_RS26800 | Not Available | Negative | 238877 - 239791 | 33452.2 |
| is1-like element is1a family transposase | BEN53_RS26815 | Not Available | Positive | 240147 - 240844 | 26483.3 |
| wbuc family cupin fold metalloprotein | BEN53_RS26820 | Not Available | Negative | 241024 - 241537 | 17956.5 |
| wbuc family cupin fold metalloprotein | BEN53_RS27400 | Not Available | Negative | 241598 - 241702 | 3832.48 |
| wbuc family cupin fold metalloprotein | BEN53_RS26830 | Not Available | Negative | 241704 - 242027 | 12961.1 |
| repb family plasmid replication initiator protein | BEN53_RS26840 | Not Available | Positive | 242773 - 243750 | 37317.0 |
| tyrosine-type recombinase/integrase | BEN53_RS26845 | Not Available | Negative | 244035 - 244775 | 28220.6 |
| hypothetical protein | BEN53_RS26850 | Not Available | Negative | 244896 - 245084 | 7211.62 |
| antimicrobial resistance protein mig-14 | BEN53_RS26855 | Not Available | Negative | 245458 - 246360 | 35089.6 |
| sdr family oxidoreductase | BEN53_RS26860 | Not Available | Negative | 246429 - 247538 | 41024.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




