Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nis family aerobactin synthetase iucc | BEN53_RS26745 | Not Available | Negative | 228596 - 230338 | 66731.5 |
| n(6)-hydroxylysine o-acetyltransferase iucb | BEN53_RS26750 | Not Available | Negative | 230338 - 231285 | 37135.1 |
| aerobactin synthase iuca | BEN53_RS26755 | Not Available | Negative | 231286 - 233010 | 65352.9 |
| mfs transporter | BEN53_RS26760 | Not Available | Positive | 233146 - 234339 | 41648.6 |
| fluoride efflux transporter crcb | BEN53_RS26765 | Not Available | Negative | 234719 - 235099 | 13637.3 |
| wbuc family cupin fold metalloprotein | BEN53_RS26775 | Not Available | Negative | 235440 - 235853 | 15115.8 |
| wbuc family cupin fold metalloprotein | BEN53_RS27770 | Not Available | Positive | 235851 - 236108 | 9168.9 |
| iron/manganese abc transporter permease subunit sitd | BEN53_RS26785 | Not Available | Negative | 236342 - 237199 | 30727.9 |
| iron/manganese abc transporter permease subunit sitc | BEN53_RS26790 | Not Available | Negative | 237196 - 238053 | 30790.6 |
| iron/manganese abc transporter atp-binding protein sitb | BEN53_RS26795 | Not Available | Negative | 238050 - 238877 | 30104.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




