Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f-type conjugal transfer pilus assembly protein trab | BEN53_RS26590 | Not Available | Negative | 208765 - 210192 | 50462.8 |
| type-f conjugative transfer system secretin trak | BEN53_RS26595 | Not Available | Negative | 210192 - 210920 | 25628.6 |
| type iv conjugative transfer system protein trae | BEN53_RS26600 | Not Available | Negative | 210907 - 211473 | 21225.5 |
| type iv conjugative transfer system protein tral | BEN53_RS26605 | Not Available | Negative | 211495 - 211806 | 11904.7 |
| type iv conjugative transfer system pilin traa | BEN53_RS26610 | Not Available | Negative | 211821 - 212186 | 12769.3 |
| conjugal transfer relaxosome dna-bindin protein tray | BEN53_RS26615 | Not Available | Negative | 212219 - 212614 | 15184.2 |
| conjugal transfer transcriptional regulator traj | BEN53_RS26620 | Not Available | Negative | 212713 - 213402 | 27063.2 |
| conjugal transfer relaxosome dna-binding protein tram | BEN53_RS26625 | Not Available | Negative | 213589 - 213972 | 14518.3 |
| transglycosylase slt domain-containing protein | BEN53_RS26630 | Not Available | Positive | 214305 - 214895 | 22413.1 |
| duf932 domain-containing protein | BEN53_RS26635 | Not Available | Negative | 215192 - 216013 | 31605.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




