Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fertility inhibition protein fino | BEN53_RS26440 | Not Available | Negative | 180188 - 180748 | 21052.6 |
| uils family quorum-quenching n-acyl-homoserine lactonase | BEN53_RS26445 | Not Available | Negative | 180851 - 181711 | 31736.2 |
| conjugal transfer pilus acetylase trax | BEN53_RS26450 | Not Available | Negative | 181770 - 182516 | 27759.0 |
| conjugative transfer relaxase/helicase trai | BEN53_RS26455 | Not Available | Negative | 182536 - 187806 | 192030.0 |
| toxin-antitoxin system antitoxin vapb | BEN53_RS26460 | Not Available | Positive | 187888 - 188115 | 8597.09 |
| type ii toxin-antitoxin system trna(fmet)-specific endonuclease vapc | BEN53_RS26465 | Not Available | Positive | 188115 - 188513 | 14902.1 |
| type iv conjugative transfer system coupling protein trad | BEN53_RS26470 | Not Available | Negative | 188522 - 190675 | 81532.6 |
| conjugal transfer complement resistance protein trat | BEN53_RS26475 | Not Available | Negative | 190928 - 191659 | 25932.2 |
| entry exclusion protein | BEN53_RS26480 | Not Available | Negative | 191691 - 192188 | 19076.2 |
| conjugal transfer mating-pair stabilization protein trag | BEN53_RS26485 | Not Available | Negative | 192204 - 195026 | 102681.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




