Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Dna packaging protein | BEN53_RS05115 | Not Available | Positive | 988160 - 990085 | 73305.5 |
| Head-tail joining protein | BEN53_RS05120 | Not Available | Positive | 990082 - 990288 | 7613.19 |
| Capsid component | BEN53_RS05125 | Not Available | Positive | 990285 - 991886 | 59465.9 |
| Capsid component | BEN53_RS05130 | Not Available | Positive | 991867 - 993186 | 46007.5 |
| Head-dna stabilization protein | BEN53_RS05135 | Not Available | Positive | 993196 - 993528 | 11571.5 |
| Capsid component | BEN53_RS05140 | Not Available | Positive | 993584 - 994609 | 38097.4 |
| Dna packaging protein | BEN53_RS05145 | Not Available | Positive | 994651 - 995049 | 14337.8 |
| Head-tail joining protein | BEN53_RS05150 | Not Available | Positive | 995061 - 995414 | 12793.8 |
| Tail component | BEN53_RS05155 | Not Available | Positive | 995426 - 996004 | 21618.1 |
| Tail component | BEN53_RS05160 | Not Available | Positive | 996001 - 996396 | 14704.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




