Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BEN53_RS26265 | Not Available | Positive | 156872 - 157000 | 5053.98 |
| hypothetical protein | BEN53_RS26270 | Not Available | Positive | 157038 - 157523 | 19470.7 |
| is4-like element isaba1 family transposase | BEN53_RS26285 | Not Available | Negative | 157720 - 158810 | 42953.4 |
| sulfonamide-resistant dihydropteroate synthase sul2 | BEN53_RS26290 | Not Available | Positive | 158900 - 159715 | 28485.2 |
| wbuc family cupin fold metalloprotein | BEN53_RS26295 | Not Available | Positive | 159802 - 160044 | 8820.85 |
| is91-like element isvsa3 family transposase | BEN53_RS26305 | Not Available | Negative | 160280 - 161773 | 55691.4 |
| lysr family transcriptional regulator | BEN53_RS26310 | Not Available | Negative | 161885 - 162190 | 11146.6 |
| chloramphenicol/florfenicol efflux mfs transporter flor | BEN53_RS26315 | Not Available | Negative | 162218 - 163432 | 42713.4 |
| duf3363 domain-containing protein | BEN53_RS27725 | Not Available | Negative | 163649 - 164533 | 33025.4 |
| is91-like element isvsa3 family transposase | BEN53_RS26325 | Not Available | Negative | 164564 - 166057 | 55691.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




