Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fidl-like protein | BEN53_RS26205 | Not Available | Positive | 148476 - 148994 | 19343.1 |
| fosfomycin resistance glutathione transferase fosa3 | BEN53_RS26210 | Not Available | Negative | 148999 - 149415 | 15402.2 |
| wbuc family cupin fold metalloprotein | BEN53_RS26215 | Not Available | Negative | 149675 - 149992 | 12194.7 |
| extended-spectrum class a beta-lactamase ctx-m-14 | BEN53_RS26220 | Not Available | Negative | 150027 - 150902 | 30981.2 |
| is6-like element is26 family transposase | BEN53_RS26230 | Not Available | Negative | 151205 - 151909 | 27896.9 |
| aminoglycoside n-acetyltransferase aac(3)-iva | BEN53_RS26235 | Not Available | Positive | 152023 - 152799 | 27907.6 |
| aminoglycoside o-phosphotransferase aph(4)-ia | BEN53_RS26245 | Not Available | Positive | 153028 - 154053 | 38034.7 |
| wbuc family cupin fold metalloprotein | BEN53_RS26250 | Not Available | Positive | 154128 - 154364 | 8257.95 |
| is6 family transposase | BEN53_RS26255 | Not Available | Negative | 154475 - 155227 | 29245.3 |
| wbuc family cupin fold metalloprotein | BEN53_RS26260 | Not Available | Positive | 155289 - 156812 | 56084.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




