Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BEN53_RS25745 | Not Available | Positive | 78247 - 78837 | 22355.8 |
| hypothetical protein | BEN53_RS25750 | Not Available | Positive | 78845 - 79102 | 9500.35 |
| hypothetical protein | BEN53_RS25755 | Not Available | Positive | 79176 - 79712 | 20015.0 |
| hypothetical protein | BEN53_RS25760 | Not Available | Positive | 79729 - 80175 | 17581.1 |
| dna replication terminus site-binding protein | BEN53_RS25765 | Not Available | Positive | 80266 - 81228 | 36237.6 |
| hypothetical protein | BEN53_RS25770 | Not Available | Positive | 81238 - 82113 | 33976.3 |
| is30-like element isapl1 family transposase | BEN53_RS25775 | Not Available | Positive | 82143 - 83117 | 37701.3 |
| phosphoethanolamine--lipid a transferase mcr-1.1 | BEN53_RS25780 | Not Available | Positive | 83313 - 84938 | 60127.4 |
| pap2 family protein | BEN53_RS25785 | Not Available | Positive | 85010 - 85732 | 26832.1 |
| hypothetical protein | BEN53_RS27360 | Not Available | Positive | 85758 - 86102 | 12880.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




