Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plp-dependent aminotransferase family protein | BEN53_RS01805 | Not Available | Negative | 350879 - 352291 | 53121.8 |
| duf1127 domain-containing protein | BEN53_RS01810 | Not Available | Positive | 352468 - 352632 | 6679.14 |
| endoribonuclease syme | BEN53_RS01815 | Not Available | Negative | 352674 - 353012 | 12314.7 |
| hypothetical protein | BEN53_RS01820 | Not Available | Negative | 353227 - 353895 | 26013.2 |
| hypothetical protein | BEN53_RS01825 | Not Available | Negative | 353889 - 354062 | 6566.95 |
| restriction endonuclease | BEN53_RS01830 | Not Available | Negative | 354107 - 355273 | 44257.1 |
| brnt family toxin | BEN53_RS01835 | Not Available | Positive | 355470 - 355757 | 11224.3 |
| brna antitoxin family protein | BEN53_RS01840 | Not Available | Positive | 355744 - 356046 | 11538.6 |
| gtpase | BEN53_RS01845 | Not Available | Negative | 356080 - 357036 | 35667.8 |
| ybdd/yjix family protein | BEN53_RS01850 | Not Available | Negative | 357047 - 357250 | 7729.24 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




