Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vwa domain-containing protein | BEN53_RS25695 | Not Available | Positive | 68135 - 70147 | 74354.8 |
| hypothetical protein | BEN53_RS25700 | Not Available | Positive | 70219 - 70440 | 8282.82 |
| toprim domain-containing protein | BEN53_RS25705 | Not Available | Positive | 70554 - 71786 | 46439.4 |
| hypothetical protein | BEN53_RS25710 | Not Available | Positive | 72057 - 72578 | 20268.3 |
| hypothetical protein | BEN53_RS25715 | Not Available | Positive | 72657 - 73535 | 34097.1 |
| hypothetical protein | BEN53_RS25720 | Not Available | Positive | 73606 - 74541 | 36381.6 |
| hypothetical protein | BEN53_RS25725 | Not Available | Positive | 74610 - 75530 | 34891.4 |
| hypothetical protein | BEN53_RS25730 | Not Available | Positive | 75597 - 76535 | 35757.5 |
| hypothetical protein | BEN53_RS25735 | Not Available | Positive | 76707 - 77663 | 35988.9 |
| hypothetical protein | BEN53_RS25740 | Not Available | Positive | 77927 - 78202 | 10607.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




