Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inchi-type conjugal transfer protein trhu | BEN53_RS25650 | Not Available | Positive | 55578 - 56633 | 38809.4 |
| inchi-type conjugal transfer protein trhn | BEN53_RS25655 | Not Available | Positive | 56652 - 59840 | 116884.0 |
| hypothetical protein | BEN53_RS25660 | Not Available | Negative | 59869 - 60741 | 31362.9 |
| inchi-type conjugal transfer helicase trhi | BEN53_RS25665 | Not Available | Positive | 60921 - 62705 | 67330.2 |
| hypothetical protein | BEN53_RS25670 | Not Available | Positive | 63100 - 63972 | 33536.7 |
| hypothetical protein | BEN53_RS25675 | Not Available | Positive | 64030 - 64407 | 14065.2 |
| hypothetical protein | BEN53_RS25680 | Not Available | Positive | 64468 - 65445 | 38236.2 |
| atp-binding protein | BEN53_RS25685 | Not Available | Positive | 65503 - 66561 | 39111.4 |
| hypothetical protein | BEN53_RS27355 | Not Available | Positive | 66693 - 66866 | 6497.95 |
| duf3150 domain-containing protein | BEN53_RS25690 | Not Available | Positive | 66930 - 68057 | 42755.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




