Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is110-like element is5075 family transposase | BEN53_RS25485 | Not Available | Positive | 20703 - 21707 | 37527.7 |
| wbuc family cupin fold metalloprotein | BEN53_RS27710 | Not Available | Negative | 21979 - 22065 | 3436.24 |
| sulfonamide-resistant dihydropteroate synthase sul2 | BEN53_RS25500 | Not Available | Positive | 22395 - 23210 | 28485.2 |
| aminoglycoside o-phosphotransferase aph(3'')-ib | BEN53_RS25505 | Not Available | Positive | 23271 - 24074 | 29587.3 |
| aminoglycoside o-phosphotransferase aph(6)-id | BEN53_RS25510 | Not Available | Positive | 24074 - 24910 | 30824.8 |
| broad-spectrum class a beta-lactamase tem-1 | BEN53_RS25520 | Not Available | Negative | 25141 - 26001 | 31517.0 |
| recombinase family protein | BEN53_RS25525 | Not Available | Negative | 26184 - 26741 | 20604.8 |
| hypothetical protein | BEN53_RS27235 | Not Available | Positive | 26905 - 27045 | 5190.27 |
| is6-like element is26 family transposase | BEN53_RS25535 | Not Available | Positive | 27163 - 27867 | 27896.9 |
| type-f conjugative transfer system secretin trak | BEN53_RS25545 | Not Available | Positive | 27961 - 29184 | 43564.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




