Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| maltose/maltodextrin abc transporter atp-binding protein malk | BEN53_RS25135 | Not Available | Positive | 4950357 - 4951472 | 40993.0 |
| maltoporin lamb | BEN53_RS25140 | Not Available | Positive | 4951544 - 4952884 | 49930.8 |
| maltose operon protein malm | BEN53_RS25145 | Not Available | Positive | 4953127 - 4954047 | 31916.3 |
| sopa family protein | BEN53_RS25150 | Not Available | Positive | 4954275 - 4955855 | 61156.9 |
| chorismate lyase | BEN53_RS25160 | Not Available | Positive | 4956078 - 4956575 | 18795.0 |
| 4-hydroxybenzoate octaprenyltransferase | BEN53_RS25165 | Not Available | Positive | 4956588 - 4957460 | 32513.6 |
| glycerol-3-phosphate 1-o-acyltransferase plsb | BEN53_RS25170 | Not Available | Negative | 4957615 - 4960038 | 91386.9 |
| diacylglycerol kinase | BEN53_RS25175 | Not Available | Positive | 4960209 - 4960577 | 13245.4 |
| transcriptional repressor lexa | BEN53_RS25180 | Not Available | Positive | 4960687 - 4961295 | 22359.1 |
| mate family efflux transporter dinf | BEN53_RS25185 | Not Available | Positive | 4961368 - 4962693 | 47648.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




