Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-6-phosphate isomerase | BEN53_RS25080 | Not Available | Positive | 4939328 - 4940977 | 61547.1 |
| exopolysaccharide production protein yjbe | BEN53_RS25085 | Not Available | Positive | 4941331 - 4941573 | 7386.46 |
| yjbf family lipoprotein | BEN53_RS25090 | Not Available | Positive | 4941687 - 4942325 | 23873.3 |
| capsule biosynthesis gfcc family protein | BEN53_RS25095 | Not Available | Positive | 4942322 - 4943059 | 26331.3 |
| yjbh domain-containing protein | BEN53_RS25100 | Not Available | Positive | 4943059 - 4945155 | 78492.1 |
| hypothetical protein | BEN53_RS25105 | Not Available | Negative | 4945202 - 4945480 | 10079.3 |
| phosphate-starvation-inducible protein psie | BEN53_RS25110 | Not Available | Positive | 4945695 - 4946105 | 15597.7 |
| maltose abc transporter permease malg | BEN53_RS25115 | Not Available | Negative | 4946199 - 4947089 | 32227.3 |
| maltose abc transporter permease malf | BEN53_RS25120 | Not Available | Negative | 4947104 - 4948648 | 57017.6 |
| maltose/maltodextrin abc transporter substrate-binding protein male | BEN53_RS25125 | Not Available | Negative | 4948802 - 4949992 | 43389.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




