Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts system mannose/fructose/sorbose family transporter subunit iid | BEN53_RS24910 | Not Available | Negative | 4913321 - 4914145 | 29457.9 |
| pts mannose/fructose/sorbose transporter subunit iic | BEN53_RS24915 | Not Available | Negative | 4914156 - 4914953 | 28032.2 |
| pts system mannose/fructose/n-acetylgalactosamine-transporter subunit iib | BEN53_RS24920 | Not Available | Negative | 4915019 - 4915513 | 18405.2 |
| mannose/fructose/sorbose pts transporter subunit iia | BEN53_RS24925 | Not Available | Negative | 4915513 - 4915920 | 14817.9 |
| sdr family oxidoreductase | BEN53_RS24930 | Not Available | Negative | 4915930 - 4916736 | 28995.6 |
| sugar-binding transcriptional regulator | BEN53_RS24935 | Not Available | Negative | 4916806 - 4917753 | 34893.8 |
| 23s rrna pseudouridine(2604) synthase rluf | BEN53_RS24940 | Not Available | Positive | 4918101 - 4918973 | 32462.4 |
| duf3811 domain-containing protein | BEN53_RS24945 | Not Available | Negative | 4918974 - 4919246 | 10546.7 |
| slipin family protein | BEN53_RS24950 | Not Available | Positive | 4919775 - 4920902 | 42384.5 |
| lysine-sensitive aspartokinase 3 | BEN53_RS25065 | Not Available | Negative | 4937454 - 4938803 | 48580.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




