Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts fructose transporter subunit eiic | BEN53_RS24480 | Not Available | Positive | 4817698 - 4818777 | 37048.6 |
| pts fructose-like transporter subunit iib | BEN53_RS24485 | Not Available | Positive | 4818792 - 4819112 | 11248.6 |
| formate c-acetyltransferase | BEN53_RS24490 | Not Available | Positive | 4819163 - 4821460 | 85900.6 |
| [formate-c-acetyltransferase]-activating enzyme | BEN53_RS24495 | Not Available | Positive | 4821426 - 4822304 | 32485.6 |
| pts fructose-like transporter subunit iib | BEN53_RS24500 | Not Available | Positive | 4822306 - 4822647 | 12652.3 |
| arac family transcriptional regulator | BEN53_RS24505 | Not Available | Negative | 4822634 - 4823485 | 32145.2 |
| phosphoethanolamine transferase cpta | BEN53_RS24510 | Not Available | Negative | 4823634 - 4825367 | 66601.4 |
| phosphoenolpyruvate carboxylase | BEN53_RS24515 | Not Available | Negative | 4825550 - 4828201 | 99082.3 |
| acetylornithine deacetylase | BEN53_RS24520 | Not Available | Negative | 4828613 - 4829764 | 42294.6 |
| n-acetyl-gamma-glutamyl-phosphate reductase | BEN53_RS24525 | Not Available | Positive | 4829918 - 4830922 | 35954.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




