Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein ftsn | BEN53_RS24380 | Not Available | Negative | 4790171 - 4791130 | 35799.2 |
| dna-binding transcriptional regulator cytr | BEN53_RS24385 | Not Available | Negative | 4791222 - 4792247 | 37822.1 |
| primosomal protein n' | BEN53_RS24390 | Not Available | Negative | 4792403 - 4794601 | 81694.7 |
| 50s ribosomal protein l31 | BEN53_RS24395 | Not Available | Positive | 4794804 - 4795016 | 7871.49 |
| yiix family permuted papain-like enzyme | BEN53_RS24400 | Not Available | Negative | 4795077 - 4795685 | 23156.0 |
| met regulon transcriptional regulator metj | BEN53_RS24405 | Not Available | Negative | 4795745 - 4796062 | 12141.4 |
| cystathionine gamma-synthase | BEN53_RS24410 | Not Available | Positive | 4796339 - 4797499 | 41510.7 |
| bifunctional aspartate kinase/homoserine dehydrogenase ii | BEN53_RS24415 | Not Available | Positive | 4797502 - 4799934 | 88955.8 |
| nucleoside-specific channel-forming protein tsx | BEN53_RS24420 | Not Available | Negative | 4800151 - 4801011 | 32770.4 |
| bifunctional metallophosphatase/5'-nucleotidase | BEN53_RS24425 | Not Available | Negative | 4801090 - 4802709 | 59223.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




