Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class ii fructose-bisphosphatase | BEN53_RS24330 | Not Available | Negative | 4780887 - 4781897 | 35854.6 |
| glycerol kinase glpk | BEN53_RS24335 | Not Available | Negative | 4782068 - 4783576 | 56233.9 |
| glycerol uptake facilitator protein glpf | BEN53_RS24340 | Not Available | Negative | 4783599 - 4784444 | 29781.7 |
| septal ring assembly protein zapb | BEN53_RS24345 | Not Available | Positive | 4784869 - 4785114 | 9635.4 |
| hypothetical protein | BEN53_RS24350 | Not Available | Negative | 4785153 - 4785779 | 23542.4 |
| hypothetical protein | BEN53_RS24355 | Not Available | Negative | 4785902 - 4786576 | 25400.2 |
| ribonuclease e activity regulator rraa | BEN53_RS24360 | Not Available | Negative | 4786636 - 4787121 | 17361.4 |
| 1,4-dihydroxy-2-naphthoate polyprenyltransferase | BEN53_RS24365 | Not Available | Negative | 4787214 - 4788140 | 33596.0 |
| hslu--hslv peptidase atpase subunit | BEN53_RS24370 | Not Available | Negative | 4788207 - 4789538 | 49569.7 |
| atp-dependent protease subunit hslv | BEN53_RS24375 | Not Available | Negative | 4789548 - 4790078 | 19094.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




