Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yiig family protein | BEN53_RS24170 | Not Available | Positive | 4750605 - 4751660 | 39262.4 |
| putative frv operon regulatory protein | BEN53_RS24175 | Not Available | Negative | 4751710 - 4753458 | 66117.8 |
| aminopeptidase | BEN53_RS24180 | Not Available | Negative | 4753458 - 4754528 | 38793.8 |
| pts fructose-like transporter subunit iibc | BEN53_RS24185 | Not Available | Negative | 4754518 - 4755969 | 51150.5 |
| pts fructose transporter subunit iia | BEN53_RS24190 | Not Available | Negative | 4755980 - 4756426 | 16118.4 |
| carbohydrate porin | BEN53_RS24195 | Not Available | Positive | 4756903 - 4758297 | 51946.3 |
| l-rhamnose mutarotase | BEN53_RS24200 | Not Available | Negative | 4758338 - 4758652 | 12244.4 |
| rhamnulose-1-phosphate aldolase | BEN53_RS24205 | Not Available | Negative | 4758662 - 4759486 | 30018.0 |
| l-rhamnose isomerase | BEN53_RS24210 | Not Available | Negative | 4759763 - 4761022 | 47285.0 |
| rhamnulokinase | BEN53_RS24215 | Not Available | Negative | 4761019 - 4762488 | 54140.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




