Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is4-like element is4 family transposase | BEN53_RS24010 | Not Available | Positive | 4715891 - 4717237 | 51144.8 |
| gntr family transcriptional regulator | BEN53_RS24015 | Not Available | Positive | 4717441 - 4718151 | 26940.3 |
| sugar phosphate isomerase/epimerase family protein | BEN53_RS24020 | Not Available | Positive | 4718159 - 4719139 | 37001.0 |
| mfs transporter | BEN53_RS24025 | Not Available | Positive | 4719241 - 4720506 | 46382.0 |
| porin ompl | BEN53_RS24030 | Not Available | Negative | 4720598 - 4721290 | 27161.6 |
| mfs transporter | BEN53_RS24035 | Not Available | Negative | 4721357 - 4722760 | 51656.0 |
| mfs transporter | BEN53_RS24040 | Not Available | Negative | 4722803 - 4724188 | 50985.1 |
| sulfoquinovosidase | BEN53_RS24045 | Not Available | Negative | 4724234 - 4726270 | 77147.9 |
| aldose-1-epimerase | BEN53_RS24050 | Not Available | Negative | 4726468 - 4727367 | 33073.5 |
| sulfoquinovose isomerase | BEN53_RS24055 | Not Available | Negative | 4727487 - 4728728 | 47421.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




