Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ala | Not Available | Not Available | Positive | 4693137 - 4693212 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 4693395 - 4696298 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 4696394 - 4696509 | Not Available |
| molybdopterin-guanine dinucleotide biosynthesis protein mobb | BEN53_RS23920 | Not Available | Negative | 4696612 - 4697139 | 19353.5 |
| molybdenum cofactor guanylyltransferase moba | BEN53_RS23925 | Not Available | Negative | 4697121 - 4697705 | 21720.2 |
| yihd family protein | BEN53_RS23930 | Not Available | Positive | 4697775 - 4698044 | 10273.5 |
| stress response kinase srka | BEN53_RS23935 | Not Available | Positive | 4698121 - 4699107 | 38083.4 |
| thiol:disulfide interchange protein dsba | BEN53_RS23940 | Not Available | Positive | 4699124 - 4699750 | 23105.8 |
| ydga family protein | BEN53_RS23945 | Not Available | Positive | 4699905 - 4701335 | 52570.8 |
| acyltransferase | BEN53_RS23950 | Not Available | Negative | 4701376 - 4702308 | 36290.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




