Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysophospholipase l2 | BEN53_RS23705 | Not Available | Positive | 4651312 - 4652334 | 38911.4 |
| sugar/pyridoxal phosphate phosphatase yigl | BEN53_RS23710 | Not Available | Positive | 4652342 - 4653142 | 29723.5 |
| biotin transporter | BEN53_RS23715 | Not Available | Positive | 4653218 - 4654117 | 33786.0 |
| hth-type transcriptional regulator metr | BEN53_RS23720 | Not Available | Negative | 4654005 - 4654958 | 35645.1 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | BEN53_RS23725 | Not Available | Positive | 4655076 - 4657337 | 84583.0 |
| lysr substrate-binding domain-containing protein | BEN53_RS23730 | Not Available | Negative | 4657431 - 4658327 | 33437.6 |
| cytosine permease | BEN53_RS23735 | Not Available | Negative | 4658405 - 4659628 | 42588.4 |
| glutamyl-trna amidotransferase | BEN53_RS23740 | Not Available | Negative | 4659654 - 4660043 | 14311.2 |
| carbamate kinase | BEN53_RS23745 | Not Available | Negative | 4660060 - 4661016 | 33995.8 |
| duf1116 domain-containing protein | BEN53_RS23750 | Not Available | Negative | 4661009 - 4662433 | 50024.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




