Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 2016C-3878 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain 2016C-3878 chromosome, complete genome.
Gene Summary
Adenine Count
1237340 bp
Thymine Count
1237176 bp
Guanine Count
1258646 bp
Cytosine Count
1262294 bp
Genome Length
4995456 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
250 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein ysgd | BEN53_RS27510 | Not Available | Positive | 4642591 - 4642647 | 2140.55 |
| magnesium/cobalt transporter cora | BEN53_RS23660 | Not Available | Positive | 4642799 - 4643749 | 36591.8 |
| duf943 family protein | BEN53_RS23665 | Not Available | Negative | 4643785 - 4644282 | 20021.7 |
| ypo3983 family protein | BEN53_RS23670 | Not Available | Negative | 4644279 - 4645127 | 32923.2 |
| eama family transporter rard | BEN53_RS23675 | Not Available | Negative | 4645438 - 4646328 | 33285.0 |
| acyl-coa thioesterase yigi | BEN53_RS23680 | Not Available | Negative | 4646380 - 4646847 | 17163.8 |
| phospholipase a | BEN53_RS23685 | Not Available | Positive | 4647012 - 4647881 | 33122.8 |
| atp-dependent dna helicase recq | BEN53_RS23690 | Not Available | Positive | 4648006 - 4649835 | 68395.7 |
| threonine export protein rhtc | BEN53_RS23695 | Not Available | Positive | 4649899 - 4650519 | 22561.6 |
| homoserine/homoserine lactone efflux protein | BEN53_RS23700 | Not Available | Negative | 4650581 - 4651201 | 22423.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




